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The following menu items will bring
up a dialog with the parameters for the particular processing and buttons to
begin processing. Whenever a button is pressed in one of the dialogs, an
Image Selection dialog will be
presented to select the images for processing. During most processing, a
status indicator will appear in the Main Window as shown below.

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Reconstruction
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Venograph, use this dialog to perform reconstruction on raw image data to
enhance vascular structures. |
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Pre-Processing
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Fit
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Quick, use this dialog to perform
restoration on images to increase the signal to Noise Ratio. Only the
minimal options are displayed for the typical use of restoration. |
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Complete, use this dialog to perform
restoration on images to increase the signal to Noise Ratio. All
possible options are displayed for the most flexible use of restoration. |
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Orthogonal Views, use this dialog to change the image orientation (sagital,
coronal, or axial) |
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Smooth, use this dialog to apply kernels on images. |
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Deformable Contour, use this
dialog to deform a single contour. |
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Segmentation, use
this dialog to apply various filters
to a set of images. |
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Cluster
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Image Plot, use this dialog to plot 2-4
images, create region of interest images, and classify images. |
Iso-Data, to separate images into their components.
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Post-Processing
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Substance
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Browsers, use
this dialog to perform substance overlap processing on sets of filtered images. |
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Images, use
this dialog to perform substance overlap processing on filtered images. |
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Miscellaneous
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Math, use
this dialog to perform various math operations on an image or set of images. |
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Dicom Header, use this dialog to view and modify the contents of the DICOM header
for an image or set of images. |
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Simulations, use this dialog to create
simulated images from the selected signature files. |
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External Programs, use this
window to run external programs that accept HFH format image file names in the
command line or output a list of HFH format image file names. |
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3d
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Registration, use this dialog to
register two sets of images using contours. |
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Spectroscopy, use this dialog to
perform spectroscopic analysis on raw spectral data.
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Loading Localizer Image and Raw
Spectra Files, use this dialog to load the localizer images and the
associated raw spectral data.
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2d FFT Processing, use this
dialog to perform 2d FFT processing on each spectra.
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Time Domain Processing, use
this dialog to perform time domain processing on each spectra.
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Display
Spectral Data
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Calibrate Parts Per
Million Scale
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Susceptibility Processing,
use this dialog to align spectra to a reference spectra.
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Batch Analysis Processing,
use this dialog to calculate the area under the peaks of the spectra, e.g., choline, creatine, etc.
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Print Functions, use this dialog
to print the spectroscopy histogram to a file or printer.
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Eigentool
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