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References
for Smooth functions and Region of Interest functions
-
A.K. Jain, Fundamentals of Digital
Image Processing, Prentice Hall, Englewood Cliffs, New Jersey, 1989.
-
W.K. Pratt, Digital Image
Processing, John Wiley & Sons, Inc. New York, 1978.
References for
Iso-Data
-
H. Soltanian-Zadeh, J.P. Windham,
and L. Robbins: "Semi-Supervised
Segmentation of MRI Stroke Studies." Presented at and Published in the
Proceedings of SPIE Medical Imaging 1997: Image Processing Conference, Newport
Beach, CA, Feb. 1997.
-
K.M.A. Welch, J.P. Windham, R.
Knight, V. Nagesh, J. Hugg, M. Jacobs, D.J. Peck, P. Booker, M. Dereski, S.
Levine, ``A Model to Predict the Histopathology of Human Stroke Using
Diffusion and T2-Weighted Magnetic Resonance Imaging,'' Stroke, vol. 26, pp.
1983-1989, 1995.
-
K. Takahashi, H. Nakatani, and K.
Abe, ``Color image segmentation using ISODATA clustering method,'' Proceedings
of Second Asian Conference on Computer Vision, vol. 1, pp. 523-527, 1995.
-
Jacobs, M. A., Knight, R. A.,
Soltanian-Zadeh, H., Zheng, Z. G., Goussev, A. V., Peck, D. J., Windham, J.
P., and Chopp, M. "Unsupervised segmentation of multiparameter MRI in
experimental cerebral ischemia with comparison to T2, diffusion, and ADC MRI
parameters and histopathological validation," Journal of Magnetic Resonance
Imaging. 11: 425-37, 2000.
-
Nagesh, V., Welch, K. M.,
Windham, J. P., Patel, S., Levine, S. R., Hearshen, D., Peck, D., Robbins, K.,
D'Olhaberriague, L., Soltanian-Zadeh, H., and Boska, M. D. "Time course of ADCw
changes in ischemic stroke: beyond the human eye," Stroke. 29:
1778-82, 1998.
References for the Multi-Wavelet Texture function
-
R. Nezafat and H. Soltanian-Zadeh:
"Multiwavelet
Based Feature Extraction for MRI Segmentation." Presented at and Published
in the Proceedings of SPIE Annual Meeting, San Diego, CA, July 1998.
-
H. Soltanian-Zadeh, R. Nezafat, and
J.P. Windham: "Is
There Texture Information in Standard Brain MRI?" Presented at and Published
in the Proceedings of SPIE Medical Imaging 1999: Image Processing Conference,
San Diego, CA, Feb. 1999.
References for
Region of Interest Thresholds
-
J.S. Weszka, ``A survey of
threshold selection techniques,'' Comput. Graphics Image Process., vol. 7, pp.
259-265, 1978.
-
R. Kohler, ``A segmentation system
based on thresholding,'' Comput. Graphics Image Process., vol. 15, pp. 319-337,
1981.
References for
Contour regions of interest for Registration
-
H. Soltanian-Zadeh and J.P.
Windham: "A
Multi-resolution Approach for Intracranial Volume Segmentation from Brain Images."
Medical Physics, vol. 24, no. 12, pp. 1844-1853, Dec. 1997.
References for the Automated Image Registration Program from
UCLA (web
site):
-
Woods RP, Cherry SR, Mazziotta JC.
Rapid automated algorithm for aligning and reslicing PET images. Journal of
Computer Assisted Tomography 1992;16:620-633.
The original AIR
manuscript validating the intramodality method implemented in AIR 1.0.
-
Woods RP, Mazziotta JC, Cherry
SR. MRI-PET registration with automated algorithm. Journal of Computer
Assisted Tomography 1993;17:536-546.
The method used
for intermodality registration as implemented in AIR 1.0
-
Woods RP, Grafton ST, Holmes CJ,
Cherry SR, Mazziotta JC. Automated image registration: I. General methods and
intrasubject, intramodality validation. Journal of Computer Assisted
Tomography 1998;22:141-154.
Description of AIR
3.0 and validation for intrasubject, intramodality registration of MRI data
and intrasubject, intramodality registration of PET data.
-
Woods RP, Grafton ST, Watson JDG,
Sicotte NL, Mazziotta JC. Automated image registration: II. Intersubject
validation of linear and nonlinear models. Journal of Computer Assisted
Tomography 1998;22:155-165.
Validation of AIR
3.0 for intersubject registration.
References for the CTN software package from the Mallinkrodt
Institute of Radiology (web
site, ftp
download)
- Moore, S.M., Hoffman, S.A., Beecher, D.E., "DICOM Shareware: A Public
Implementation of the DICOM Standard," in Medical Imaging 1994-PACS: Design
and Evaluation, R. Gilbert Jost, Editor, Proc SPIE 2165, pp. 772-781 (1994)
References for Mutual Information Registration
-
F. Maes, A. Collignon, D.
Vandermeulen, G. Marchal, and P. Suetens "Multimodality Image Registration by
Maximization of Mutual Information," IEEE Transactions on Medical Imaging. Vol.
16, No. 2, pp. 187-198, April 1997.
References for use of Registration and Warping
-
Jacobs, M., Windham, J.,
Soltanian-Zadeh, H., Peck, D., and Knight RA "Registration
and Warping of Magnetic Resonance Images to Histological Sections," Medical
Physics. 26: 1-11, 1999.
-
Jacobs, M. A., Windham, J. P.,
Soltanian-Zadeh, H., Peck, D. J., and Knight, R. A. "Registration
and warping of magnetic resonance images to histological sections," Medical
Physics. 26: 1568-78, 1999.
-
Pelizzari, C. A., Chen, G. T.,
Spelbring, D. R., Weichselbaum, R. R., and Chen, C. T. "Accurate
three-dimensional registration of CT, PET, and/or MR images of the brain,"
Journal of Computer Assisted Tomography. 13: 20-6, 1989.
References for Warping calculation
method (Bookstein's)
-
F.L. Bookstein, ``Principal
Warps: Thin-Plate Splines and the
Decomposition of Deformations,'' IEEE Transactions on Pattern Analysis
and Machine Intelligence, vol. 11, no. 6, pp. 567-585, 1989.
References
for Restoration
-
Soltanian-Zadeh, H., Windham, J.
P., and Yagle, A. E. "A
Multidimensional Nonlinear Edge-Preserving Filter for Magnetic Resonance Image
Restoration," IEEE Transaction in Image Processing. 4: 147-161, 1995.
References for
the Eigen Segmentation Filter
-
Soltanian-Zadeh, H., Windham, J.
P., and Jenkins, J. M. "Error
propagation in Eigenimage Filtering," IEEE Transaction in Medical Imaging.
9: 405-420, 1990.
-
Soltanian-Zadeh, H., Saigal, R.,
Windham, J. P., Yagle, A. E., and Hearshen, D. O. "Optimization
of MRI Protocols and Pulse Sequence Parameters for Eigenimage Filtering,"
IEEE Transaction in Medical Imaging. 13: 161-175, 1994.
-
Windham, J. P., Abd-Allah, M. A.,
Reimann, D. A., Froelich, J. W., and Haggar, A. M. "Eigenimage filtering in MR
imaging," Journal of Computer Assisted Tomography. 12: 1-9, 1988.
-
Peck, D. J., Windham, J. P.,
Soltanian-Zadeh, H., and Roebuck, J. R. "A
fast and accurate algorithm for volume determination in MRI," Medical
Physics. 19: 599-605, 1992.
-
Peck, D. J., Windham, J. P.,
Emery, L. L., Soltanian-Zadeh, H., Hearshen, D. O., and Mikkelsen, T. "Cerebral
tumor volume calculations using planimetric and eigenimage analysis,"
Medical Physics. 23: 2035-42, 1996.
-
H. Soltanian-Zadeh, J.P. Windham,
and A.E. Yagle: "Optimal
Transformation for Correcting Partial Volume Averaging Effects in Magnetic
Resonance Imaging." IEEE Trans. Nuc. Sci., vol. 40, No. 4, pp. 1204-1212,
Aug. 1993.
References
for the Difference Segmentation Filter
-
H. Soltanian-Zadeh, J.P. Windham,
D.J. Peck, and A.E. Yagle: "A
Comparative Analysis of Several Transformations for Enhancement and
Segmentation of Magnetic Resonance Image Scene Sequences." IEEE Trans.
Med. Imag., vol. 11, no. 3, pp. 302-318, Sept. 1992.
References
for the Max-Min CNR Segmentation Filter
-
H. Soltanian-Zadeh and J.P.
Windham: "Novel
and General Approach to Linear Filter Design for CNR Enhancement of MR Images
with Multiple Interfering Features in the Scene." Journal of Electronic
Imaging, vol. 1, no. 2, pp. 171-182, April 1992.
References for the Target Point
and Location Variant functions
- H. Soltanian-Zadeh, J.P. Windham, D.J. Peck, and A.E. Yagle: "A
Comparative Analysis of Several Transformations for Enhancement and
Segmentation of Magnetic Resonance Image Scene Sequences." IEEE Trans.
Med. Imag., vol. 11, no. 3, pp. 302-318, Sept. 1992.
References for JPEG2000 support
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* Copyright (c) 2001-2002, David Janssens
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